Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox3P53784 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox3P53784 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Sox3P53784 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox3P53784 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Sox3P53784 Gm2199-201ENSMUST00000119065 874 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm14115-201ENSMUST00000119242 482 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm13537-201ENSMUST00000120467 267 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm12317-201ENSMUST00000122307 319 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm22276-201ENSMUST00000122469 129 ntBASIC5.77□□□□□ -1.49
Sox3P53784 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox3P53784 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox3P53784 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Gm25152-201ENSMUST00000157117 114 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm23669-201ENSMUST00000157470 128 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm23632-201ENSMUST00000175289 125 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm26738-201ENSMUST00000181312 601 ntBASIC5.77□□□□□ -1.49
Sox3P53784 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm20926-201ENSMUST00000194457 696 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox3P53784 Gm45724-201ENSMUST00000213031 420 ntBASIC5.77□□□□□ -1.49
Sox3P53784 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Gm7780-201ENSMUST00000214787 406 ntBASIC5.77□□□□□ -1.49
Sox3P53784 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.77□□□□□ -1.49
Sox3P53784 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.77□□□□□ -1.49
Sox3P53784 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.77□□□□□ -1.49
Sox3P53784 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Sox3P53784 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox3P53784 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
Sox3P53784 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox3P53784 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.77□□□□□ -1.49
Sox3P53784 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox3P53784 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Sox3P53784 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox3P53784 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox3P53784 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm14220-201ENSMUST00000118114 449 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm12040-201ENSMUST00000118357 537 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm13626-201ENSMUST00000119435 402 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.76□□□□□ -1.49
Sox3P53784 Gm24731-201ENSMUST00000158227 131 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Mir3095-201ENSMUST00000175552 87 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Gm9517-201ENSMUST00000195021 874 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm37235-201ENSMUST00000195171 59 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm29745-201ENSMUST00000198005 687 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox3P53784 Mir6994-201ENSMUST00000198985 73 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.76□□□□□ -1.49
Sox3P53784 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox3P53784 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Sox3P53784 Gm18996-201ENSMUST00000214851 755 ntBASIC5.76□□□□□ -1.49
Sox3P53784 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms