Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm23910-201ENSMUST00000104597 132 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm14805-201ENSMUST00000120172 340 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm15166-201ENSMUST00000120790 385 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Sox1P53783 Gm25550-201ENSMUST00000158079 128 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Gm27044-201ENSMUST00000183033 796 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Mir7j-201ENSMUST00000184427 122 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Mir6952-201ENSMUST00000185092 61 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Sox1P53783 Gm29143-201ENSMUST00000189462 201 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm29950-201ENSMUST00000195273 237 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm43015-201ENSMUST00000199087 565 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm43384-201ENSMUST00000200569 637 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm44050-201ENSMUST00000204263 527 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC7.09□□□□□ -1.27
Sox1P53783 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC7.09□□□□□ -1.27
Sox1P53783 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.09□□□□□ -1.27
Sox1P53783 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Gm10115-201ENSMUST00000076071 1228 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm23423-201ENSMUST00000082782 106 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Gm16020-201ENSMUST00000084281 210 ntBASIC7.09□□□□□ -1.27
Sox1P53783 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sox1P53783 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.09□□□□□ -1.28
Sox1P53783 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
Sox1P53783 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.09□□□□□ -1.28
Sox1P53783 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Sox1P53783 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm13728-201ENSMUST00000117471 400 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm13454-201ENSMUST00000118166 483 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm12433-201ENSMUST00000119659 255 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm3835-201ENSMUST00000120752 403 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm12807-201ENSMUST00000121546 962 ntBASIC7.08□□□□□ -1.28
Sox1P53783 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm22261-201ENSMUST00000158691 324 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm16236-201ENSMUST00000159588 379 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.08□□□□□ -1.28
Sox1P53783 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox1P53783 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm28883-201ENSMUST00000189256 369 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm28467-201ENSMUST00000190981 318 ntBASIC7.08□□□□□ -1.28
Sox1P53783 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm4742-201ENSMUST00000200261 771 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm44726-201ENSMUST00000203427 217 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm43954-201ENSMUST00000204634 544 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.08□□□□□ -1.28
Sox1P53783 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm8058-201ENSMUST00000217247 587 ntBASIC7.08□□□□□ -1.28
Sox1P53783 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.08□□□□□ -1.28
Sox1P53783 AC124729.1-202ENSMUST00000225587 938 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 AW822073-201ENSMUST00000075305 555 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm24695-201ENSMUST00000083877 83 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms