Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm17511-201ENSMUST00000172206 342 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm27186-201ENSMUST00000184223 307 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm29551-201ENSMUST00000190913 698 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm37996-201ENSMUST00000191859 367 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm8869-201ENSMUST00000195222 947 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm7626-201ENSMUST00000195801 353 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm6366-201ENSMUST00000198766 826 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm44003-201ENSMUST00000203024 490 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm20946-201ENSMUST00000212367 461 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm4822-201ENSMUST00000077551 479 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.95□□□□□ -1.62
Nkx2-1P50220 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx2-1P50220 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 AC156025.2-201ENSMUST00000225907 1533 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm14173-201ENSMUST00000117690 278 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm8692-201ENSMUST00000118102 438 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm12813-201ENSMUST00000119615 902 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm23888-201ENSMUST00000122690 253 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm16330-201ENSMUST00000128324 297 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm23674-201ENSMUST00000157473 131 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm23894-201ENSMUST00000158107 313 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm24103-201ENSMUST00000174930 77 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm23631-201ENSMUST00000175291 123 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm27601-201ENSMUST00000184794 127 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm8367-201ENSMUST00000186145 887 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Ighv1-30-201ENSMUST00000194082 349 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm43576-201ENSMUST00000197937 871 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm8190-201ENSMUST00000199603 586 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 n-R5s41-201ENSMUST00000083025 119 ntBASIC4.94□□□□□ -1.62
Nkx2-1P50220 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx2-1P50220 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms