Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm42510-201ENSMUST00000196470 2258 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm37936-201ENSMUST00000194647 1322 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm26079-201ENSMUST00000104066 133 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm12635-201ENSMUST00000117285 752 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm12520-201ENSMUST00000117493 316 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm14755-201ENSMUST00000118037 384 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm5135-201ENSMUST00000121100 573 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm14613-201ENSMUST00000122239 752 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC7.9□□□□□ -1.14
Rfx1P48377 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm21959-201ENSMUST00000178439 452 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm24969-201ENSMUST00000180331 79 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm37383-201ENSMUST00000191750 745 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm7733-201ENSMUST00000199038 919 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
Rfx1P48377 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm44604-201ENSMUST00000205475 496 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm45196-201ENSMUST00000206751 825 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Rfx1P48377 Gm3678-201ENSMUST00000218888 492 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 AC162857.1-201ENSMUST00000226614 400 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Rfx1P48377 Olfr192-201ENSMUST00000080251 925 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm23734-201ENSMUST00000083753 109 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Gm25004-201ENSMUST00000083811 161 ntBASIC7.9□□□□□ -1.14
Rfx1P48377 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
Rfx1P48377 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.9□□□□□ -1.14
Rfx1P48377 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Rfx1P48377 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Rfx1P48377 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Rfx1P48377 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.9□□□□□ -1.15
Rfx1P48377 AC153912.2-201ENSMUST00000215840 2015 ntBASIC7.9□□□□□ -1.15
Rfx1P48377 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm7739-201ENSMUST00000221131 1560 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rfx1P48377 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm6746-201ENSMUST00000108774 483 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm13486-201ENSMUST00000119910 282 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm16458-201ENSMUST00000121428 502 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm15367-201ENSMUST00000122398 1016 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm24735-201ENSMUST00000158859 118 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm17212-201ENSMUST00000166666 259 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm24923-201ENSMUST00000178201 88 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm5946-201ENSMUST00000182340 970 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm26968-201ENSMUST00000182894 481 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm27026-201ENSMUST00000183003 892 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm3496-201ENSMUST00000188283 745 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.89□□□□□ -1.15
Rfx1P48377 Gm43812-202ENSMUST00000202701 581 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Gm9655-201ENSMUST00000211321 1284 ntBASIC7.89□□□□□ -1.15
Rfx1P48377 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms