Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox6P40645 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 Gm16102-201ENSMUST00000160955 420 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox6P40645 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm37809-201ENSMUST00000195050 931 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm42776-201ENSMUST00000198031 406 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 Gm43762-201ENSMUST00000201521 295 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.55□□□□□ -1.52
Sox6P40645 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox6P40645 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox6P40645 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Sox6P40645 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Sox6P40645 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox6P40645 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.55□□□□□ -1.52
Sox6P40645 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox6P40645 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox6P40645 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.54□□□□□ -1.52
Sox6P40645 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Mir290a-201ENSMUST00000104627 83 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm14756-201ENSMUST00000116395 240 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm12399-201ENSMUST00000121475 446 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox6P40645 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm23617-201ENSMUST00000175410 95 ntBASIC5.54□□□□□ -1.52
Sox6P40645 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm37375-201ENSMUST00000193859 387 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm37758-201ENSMUST00000194275 629 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm37385-201ENSMUST00000195223 387 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm4332-201ENSMUST00000196114 346 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm43798-201ENSMUST00000202056 394 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox6P40645 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.54□□□□□ -1.52
Sox6P40645 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.54□□□□□ -1.52
Sox6P40645 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.54□□□□□ -1.52
Sox6P40645 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.54□□□□□ -1.52
Sox6P40645 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm22300-201ENSMUST00000082661 126 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox6P40645 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox6P40645 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.54□□□□□ -1.52
Sox6P40645 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox6P40645 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox6P40645 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Sox6P40645 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.53□□□□□ -1.52
Sox6P40645 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox6P40645 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox6P40645 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms