Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm25147-201ENSMUST00000083030 105 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col18a1P39061 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.04□□□□□ -1.12
Col18a1P39061 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col18a1P39061 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm42905-201ENSMUST00000196237 1611 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm6134-201ENSMUST00000117265 171 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm11393-201ENSMUST00000118019 288 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm6427-201ENSMUST00000118721 979 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm15490-201ENSMUST00000119894 387 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm12885-201ENSMUST00000122246 328 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm22143-201ENSMUST00000157401 203 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Mir6374-201ENSMUST00000184003 107 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm37700-201ENSMUST00000192617 965 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm37341-201ENSMUST00000194680 371 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm42454-201ENSMUST00000196805 1181 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm44048-201ENSMUST00000204531 361 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 AC158803.2-201ENSMUST00000219452 679 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 AC131745.1-201ENSMUST00000223660 330 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col18a1P39061 Mir449a-201ENSMUST00000083641 91 ntBASIC8.03□□□□□ -1.12
Col18a1P39061 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Col18a1P39061 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col18a1P39061 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Col18a1P39061 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC8.02□□□□□ -1.12
Col18a1P39061 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col18a1P39061 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.12
Col18a1P39061 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm25971-201ENSMUST00000158953 286 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm8151-201ENSMUST00000184817 871 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm29111-201ENSMUST00000188823 696 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm28584-201ENSMUST00000191489 696 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm38138-201ENSMUST00000193274 696 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm37991-201ENSMUST00000194297 696 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18702-201ENSMUST00000196923 588 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm43768-201ENSMUST00000198380 1258 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18215-201ENSMUST00000204429 798 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm3257-201ENSMUST00000207217 675 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 AC154738.7-201ENSMUST00000228606 579 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm5471-201ENSMUST00000072732 337 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col18a1P39061 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col18a1P39061 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col18a1P39061 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm42541-201ENSMUST00000199871 2249 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col18a1P39061 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col18a1P39061 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Col18a1P39061 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Col18a1P39061 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm24692-201ENSMUST00000157761 146 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms