Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.67□□□□□ -1.34
Col2a1P28481 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm13579-201ENSMUST00000118519 517 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm14836-201ENSMUST00000118567 471 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm12732-201ENSMUST00000121688 180 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm26069-201ENSMUST00000157497 277 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm17121-201ENSMUST00000170414 847 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21241-201ENSMUST00000179551 934 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm17222-201ENSMUST00000180135 847 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm20819-201ENSMUST00000191091 925 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm20871-201ENSMUST00000191322 931 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm37336-202ENSMUST00000193705 468 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm2429-201ENSMUST00000194635 586 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm18591-201ENSMUST00000220568 763 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm10064-201ENSMUST00000071235 399 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Col2a1P28481 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.66□□□□□ -1.34
Col2a1P28481 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Col2a1P28481 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm29159-201ENSMUST00000187969 379 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm29736-201ENSMUST00000198189 385 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm43743-202ENSMUST00000198353 491 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm9278-201ENSMUST00000205508 553 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Gm22807-201ENSMUST00000082737 129 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.66□□□□□ -1.34
Col2a1P28481 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col2a1P28481 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.34
Col2a1P28481 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
Col2a1P28481 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col2a1P28481 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.65□□□□□ -1.34
Col2a1P28481 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col2a1P28481 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Gm22676-201ENSMUST00000116972 129 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Gm15531-201ENSMUST00000118062 252 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Gm12267-201ENSMUST00000121609 761 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Gm3216-201ENSMUST00000166927 486 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Gm3141-201ENSMUST00000168726 499 ntBASIC6.65□□□□□ -1.35
Col2a1P28481 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col2a1P28481 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.65□□□□□ -1.35
Col2a1P28481 Gm27355-201ENSMUST00000185045 128 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms