Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.01□□□□□ -1.45
Lire1P11260 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm37370-201ENSMUST00000191996 1410 ntBASIC6□□□□□ -1.45
Lire1P11260 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lire1P11260 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm37833-201ENSMUST00000194342 3256 ntBASIC6□□□□□ -1.45
Lire1P11260 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Mir674-201ENSMUST00000102421 100 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm23979-201ENSMUST00000104071 128 ntBASIC6□□□□□ -1.45
Lire1P11260 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm13772-201ENSMUST00000118431 317 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm13930-201ENSMUST00000118569 368 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm12242-201ENSMUST00000118824 738 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm4660-201ENSMUST00000131499 403 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Gm14747-201ENSMUST00000149888 984 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lire1P11260 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lire1P11260 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm8183-201ENSMUST00000183134 980 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm27998-201ENSMUST00000184902 361 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm5260-201ENSMUST00000186157 949 ntBASIC6□□□□□ -1.45
Lire1P11260 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm29470-201ENSMUST00000188007 696 ntBASIC6□□□□□ -1.45
Lire1P11260 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm2926-201ENSMUST00000205625 239 ntBASIC6□□□□□ -1.45
Lire1P11260 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6□□□□□ -1.45
Lire1P11260 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm18997-201ENSMUST00000216353 822 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm19936-201ENSMUST00000216414 838 ntBASIC6□□□□□ -1.45
Lire1P11260 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 AC131795.1-201ENSMUST00000219632 426 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lire1P11260 Gm8607-201ENSMUST00000221864 431 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6□□□□□ -1.45
Lire1P11260 AC132260.1-201ENSMUST00000225499 734 ntBASIC6□□□□□ -1.45
Lire1P11260 AC102139.1-201ENSMUST00000227000 251 ntBASIC6□□□□□ -1.45
Lire1P11260 Mir425-201ENSMUST00000083645 85 ntBASIC6□□□□□ -1.45
Lire1P11260 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lire1P11260 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6□□□□□ -1.45
Lire1P11260 Gm38277-201ENSMUST00000195172 1367 ntBASIC6□□□□□ -1.45
Lire1P11260 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm37488-201ENSMUST00000195434 3374 ntBASIC6□□□□□ -1.45
Lire1P11260 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lire1P11260 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lire1P11260 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.99□□□□□ -1.45
Lire1P11260 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lire1P11260 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Lire1P11260 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lire1P11260 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm12842-201ENSMUST00000117298 476 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm15149-201ENSMUST00000119370 360 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Gm8648-201ENSMUST00000122457 221 ntBASIC5.99□□□□□ -1.45
Lire1P11260 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.99□□□□□ -1.45
Lire1P11260 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms