Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm37358-201ENSMUST00000195492 479 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm36262-201ENSMUST00000223274 499 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp6P0C0A3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm22953-201ENSMUST00000116724 101 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm7927-201ENSMUST00000118818 880 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm14842-201ENSMUST00000119577 269 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm12396-201ENSMUST00000121600 306 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm22599-201ENSMUST00000157597 132 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm27210-201ENSMUST00000184263 402 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm18407-201ENSMUST00000192126 790 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm44091-201ENSMUST00000205212 649 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm45850-201ENSMUST00000212536 338 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.4□□□□□ -1.38
Chmp6P0C0A3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp6P0C0A3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm15332-201ENSMUST00000118386 357 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm14970-201ENSMUST00000122289 355 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm27004-201ENSMUST00000183300 727 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Mir6921-201ENSMUST00000183719 80 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm37774-201ENSMUST00000194401 245 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm42886-201ENSMUST00000199214 466 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm43105-201ENSMUST00000202987 459 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Gm8526-201ENSMUST00000079153 475 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp6P0C0A3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms