Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.25□□□□□ -1.41
TnfP06804 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.25□□□□□ -1.41
TnfP06804 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.25□□□□□ -1.41
TnfP06804 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.25□□□□□ -1.41
TnfP06804 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.25□□□□□ -1.41
TnfP06804 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.25□□□□□ -1.41
TnfP06804 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.25□□□□□ -1.41
TnfP06804 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.25□□□□□ -1.41
TnfP06804 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.25□□□□□ -1.41
TnfP06804 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
TnfP06804 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.25□□□□□ -1.41
TnfP06804 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TnfP06804 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TnfP06804 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TnfP06804 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.24□□□□□ -1.41
TnfP06804 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.24□□□□□ -1.41
TnfP06804 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.24□□□□□ -1.41
TnfP06804 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.24□□□□□ -1.41
TnfP06804 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.24□□□□□ -1.41
TnfP06804 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
TnfP06804 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TnfP06804 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TnfP06804 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm13245-201ENSMUST00000119646 260 ntBASIC6.24□□□□□ -1.41
TnfP06804 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
TnfP06804 Gm15501-202ENSMUST00000140687 625 ntBASIC6.24□□□□□ -1.41
TnfP06804 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Gm25152-201ENSMUST00000157117 114 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm23224-201ENSMUST00000158122 271 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 Gm18343-201ENSMUST00000172802 604 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.24□□□□□ -1.41
TnfP06804 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.24□□□□□ -1.41
TnfP06804 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Gm43456-201ENSMUST00000202519 457 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.24□□□□□ -1.41
TnfP06804 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.24□□□□□ -1.41
TnfP06804 Gm4032-201ENSMUST00000210886 487 ntBASIC6.24□□□□□ -1.41
TnfP06804 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.24□□□□□ -1.41
TnfP06804 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.24□□□□□ -1.41
TnfP06804 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Gm7042-201ENSMUST00000223027 384 ntBASIC6.24□□□□□ -1.41
TnfP06804 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
TnfP06804 Gm24029-201ENSMUST00000083928 143 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.24□□□□□ -1.41
TnfP06804 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TnfP06804 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TnfP06804 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.24□□□□□ -1.41
TnfP06804 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.24□□□□□ -1.41
TnfP06804 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TnfP06804 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.23□□□□□ -1.41
TnfP06804 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TnfP06804 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TnfP06804 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.23□□□□□ -1.41
TnfP06804 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TnfP06804 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.23□□□□□ -1.41
TnfP06804 Gm14335-201ENSMUST00000119165 810 ntBASIC6.23□□□□□ -1.41
TnfP06804 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Gm26372-201ENSMUST00000157831 236 ntBASIC6.23□□□□□ -1.41
TnfP06804 Gm6808-201ENSMUST00000162341 807 ntBASIC6.23□□□□□ -1.41
TnfP06804 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TnfP06804 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.23□□□□□ -1.41
TnfP06804 Gm26607-201ENSMUST00000180661 867 ntBASIC6.23□□□□□ -1.41
TnfP06804 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Gm37024-201ENSMUST00000192224 868 ntBASIC6.23□□□□□ -1.41
TnfP06804 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.23□□□□□ -1.41
TnfP06804 Gm6477-201ENSMUST00000217098 764 ntBASIC6.23□□□□□ -1.41
TnfP06804 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TnfP06804 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms