Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm18128-201ENSMUST00000172625 511 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm18205-201ENSMUST00000209215 841 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm13770-201ENSMUST00000117149 305 ntBASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm12073-201ENSMUST00000117382 524 ntBASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gm29650-201ENSMUST00000188485 742 ntBASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a3E9PWQ3 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm24265-201ENSMUST00000101833 141 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm11826-201ENSMUST00000118781 438 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm22122-201ENSMUST00000175147 200 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm24407-201ENSMUST00000177864 141 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm29196-201ENSMUST00000189239 618 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm42542-201ENSMUST00000197978 268 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Gm2429-201ENSMUST00000194635 586 ntBASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col6a3E9PWQ3 CT009480.1-201ENSMUST00000225771 4480 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm12854-201ENSMUST00000128518 297 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm7665-201ENSMUST00000076710 297 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm23795-201ENSMUST00000084006 137 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm6079-201ENSMUST00000121356 404 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm44074-201ENSMUST00000204562 337 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm26330-201ENSMUST00000082817 104 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Col6a3E9PWQ3 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms