Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm4322-201ENSMUST00000191094 336 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm4602-201ENSMUST00000203198 308 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm25415-201ENSMUST00000104220 132 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm25795-201ENSMUST00000104421 132 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm6446-201ENSMUST00000120604 818 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm12890-201ENSMUST00000120885 373 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm15300-201ENSMUST00000122324 279 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm12833-201ENSMUST00000136112 477 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm26167-201ENSMUST00000158423 253 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm16269-201ENSMUST00000160532 409 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm21542-201ENSMUST00000182307 993 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Mir6921-201ENSMUST00000183719 80 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm28527-201ENSMUST00000185210 297 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm8009-201ENSMUST00000191672 436 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm3351-201ENSMUST00000193454 505 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm18839-201ENSMUST00000204292 670 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm44837-201ENSMUST00000206863 717 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Gm18789-201ENSMUST00000216115 550 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim3Q9R1R2 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim3Q9R1R2 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm12643-201ENSMUST00000116078 374 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm22714-201ENSMUST00000116894 78 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm11902-201ENSMUST00000118849 270 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm14515-201ENSMUST00000121327 216 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm12399-201ENSMUST00000121475 446 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm26410-201ENSMUST00000157670 261 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm27512-201ENSMUST00000175328 126 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm27193-201ENSMUST00000184217 586 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Gm29385-201ENSMUST00000186831 363 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.64□□□□□ -1.51
Trim3Q9R1R2 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms