Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm14018-201ENSMUST00000119042 455 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm20453-201ENSMUST00000173968 226 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm19124-201ENSMUST00000191041 832 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm18407-201ENSMUST00000192126 790 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm37809-201ENSMUST00000195050 931 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm44463-201ENSMUST00000198895 137 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm18537-201ENSMUST00000205709 989 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm8863-201ENSMUST00000216630 926 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm5229-201ENSMUST00000039375 354 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lima1Q9ERG0 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.75□□□□□ -1.49
Lima1Q9ERG0 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm24272-201ENSMUST00000102329 98 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm22952-201ENSMUST00000116720 120 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Zfp389-201ENSMUST00000118425 675 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm15400-201ENSMUST00000118944 601 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm14267-201ENSMUST00000119751 496 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm14732-201ENSMUST00000121372 545 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm25219-201ENSMUST00000157545 330 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm23279-201ENSMUST00000157912 97 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm24081-201ENSMUST00000175177 125 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Gm24155-201ENSMUST00000175259 110 ntBASIC5.74□□□□□ -1.49
Lima1Q9ERG0 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms