Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm25345-201ENSMUST00000104505 133 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm13428-201ENSMUST00000117540 365 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm11533-201ENSMUST00000120287 477 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm14515-201ENSMUST00000121327 216 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm6541-201ENSMUST00000165542 561 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm6631-201ENSMUST00000193699 559 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm44360-201ENSMUST00000200081 82 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm45850-201ENSMUST00000212536 338 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm22370-201ENSMUST00000102422 83 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm14695-201ENSMUST00000121721 282 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm26167-201ENSMUST00000158423 253 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm43390-201ENSMUST00000196614 421 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm8863-201ENSMUST00000216630 926 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Cdc40Q9DC48 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm4342-201ENSMUST00000118982 367 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm4853-201ENSMUST00000119359 394 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm16074-201ENSMUST00000119524 444 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 Gm14237-201ENSMUST00000122080 430 ntBASIC5.56□□□□□ -1.52
Cdc40Q9DC48 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms