Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm6077-201ENSMUST00000196008 499 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm18597-201ENSMUST00000209519 694 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm4556-201ENSMUST00000217808 355 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 AC121960.3-201ENSMUST00000227077 623 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm25403-201ENSMUST00000082971 143 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm26072-201ENSMUST00000083135 107 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.54□□□□□ -1.36
Nkx6-1Q99MA9 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm24790-201ENSMUST00000104285 132 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm15021-201ENSMUST00000117832 742 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm11845-201ENSMUST00000117886 327 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm12638-201ENSMUST00000119531 298 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm11359-201ENSMUST00000120039 567 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm15181-201ENSMUST00000120142 177 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm16412-201ENSMUST00000121602 273 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm10177-202ENSMUST00000161698 207 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm17149-201ENSMUST00000164712 375 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm2855-201ENSMUST00000166765 456 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm44281-201ENSMUST00000203090 166 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm9375-201ENSMUST00000208899 903 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm9628-201ENSMUST00000222169 725 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm24621-201ENSMUST00000082679 140 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Snora21-201ENSMUST00000082967 137 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm3089-201ENSMUST00000200804 1395 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Gm3302-201ENSMUST00000201462 1395 ntBASIC6.53□□□□□ -1.36
Nkx6-1Q99MA9 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms