Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mir6921-201ENSMUST00000183719 80 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm28859-201ENSMUST00000186650 616 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm4412-201ENSMUST00000186660 433 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm21617-201ENSMUST00000188297 691 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm9541-201ENSMUST00000188409 502 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm29184-201ENSMUST00000190038 334 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm6077-201ENSMUST00000196008 499 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm42673-201ENSMUST00000202676 337 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm35619-201ENSMUST00000222548 600 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ndc1Q8VCB1 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm24790-201ENSMUST00000104285 132 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm25773-201ENSMUST00000116718 127 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm13669-201ENSMUST00000122366 457 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm23891-201ENSMUST00000158114 138 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm5456-201ENSMUST00000170706 844 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm17045-201ENSMUST00000178600 844 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Mir6989-201ENSMUST00000184812 65 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm29464-201ENSMUST00000187692 513 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Trbv9-201ENSMUST00000194494 290 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm31532-201ENSMUST00000203555 767 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm32983-201ENSMUST00000208500 505 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm6575-201ENSMUST00000222946 697 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 n-R5s196-201ENSMUST00000083136 117 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm26130-201ENSMUST00000083171 138 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms