Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm8501-201ENSMUST00000117684 432 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6620-201ENSMUST00000120113 715 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm20480-201ENSMUST00000173953 250 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37319-201ENSMUST00000193500 636 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm43906-201ENSMUST00000203194 906 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm18805-201ENSMUST00000206872 655 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm20136-201ENSMUST00000207501 891 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28bQ8CEG5 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12131-201ENSMUST00000117479 359 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15400-201ENSMUST00000118944 601 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8312-201ENSMUST00000119380 618 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm5793-201ENSMUST00000119393 630 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm14331-201ENSMUST00000120396 409 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm24103-201ENSMUST00000174930 77 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm38068-201ENSMUST00000192546 540 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm9317-201ENSMUST00000197055 862 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm45626-201ENSMUST00000210093 361 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28bQ8CEG5 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm13024-201ENSMUST00000121756 718 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm20454-201ENSMUST00000172713 221 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm23162-201ENSMUST00000175081 121 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm27601-201ENSMUST00000184794 127 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29383-201ENSMUST00000188284 480 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm5575-201ENSMUST00000190879 398 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms