Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm37477-201ENSMUST00000195215 884 ntBASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm44360-201ENSMUST00000200081 82 ntBASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm44221-201ENSMUST00000203552 388 ntBASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm4548-201ENSMUST00000208487 509 ntBASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 AC132881.2-201ENSMUST00000225474 709 ntBASIC7.15□□□□□ -1.26
Vps53Q8CCB4 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Vps53Q8CCB4 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Vps53Q8CCB4 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Vps53Q8CCB4 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Vps53Q8CCB4 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.15□□□□□ -1.27
Vps53Q8CCB4 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Vps53Q8CCB4 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Vps53Q8CCB4 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm13679-201ENSMUST00000118678 484 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm12654-201ENSMUST00000120387 587 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm15275-201ENSMUST00000154752 347 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm24719-201ENSMUST00000157520 110 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm22214-201ENSMUST00000157563 172 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm20549-201ENSMUST00000174804 429 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm24111-201ENSMUST00000175491 97 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm3307-201ENSMUST00000176164 632 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm9499-201ENSMUST00000180888 964 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm43282-201ENSMUST00000201848 2157 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm44243-201ENSMUST00000204323 692 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm45701-201ENSMUST00000212049 235 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Vps53Q8CCB4 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm10723-201ENSMUST00000195366 6918 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm15901-201ENSMUST00000117663 941 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm12115-201ENSMUST00000119969 447 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm11533-201ENSMUST00000120287 477 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm22569-201ENSMUST00000175545 124 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Mir5107-201ENSMUST00000175586 88 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm7570-201ENSMUST00000215246 698 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.13□□□□□ -1.27
Vps53Q8CCB4 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms