Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm24080-201ENSMUST00000175178 232 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm21737-201ENSMUST00000178112 664 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm20874-201ENSMUST00000178356 663 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm21744-201ENSMUST00000178403 662 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm20901-201ENSMUST00000180177 664 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Mir7212-201ENSMUST00000184098 61 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm27156-201ENSMUST00000184589 754 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm9114-201ENSMUST00000188558 997 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm20954-201ENSMUST00000189078 644 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm28090-201ENSMUST00000189458 664 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm21647-201ENSMUST00000189755 664 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Trbv22-201ENSMUST00000191697 291 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm38022-201ENSMUST00000191762 403 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm37322-201ENSMUST00000193409 337 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm4525-201ENSMUST00000198831 254 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm43973-201ENSMUST00000203562 210 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm43926-201ENSMUST00000203978 430 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm5055-201ENSMUST00000215697 581 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm10264-201ENSMUST00000220589 429 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 AC151730.2-201ENSMUST00000224027 475 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 AL606472.1-201ENSMUST00000224628 275 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm13735-201ENSMUST00000120217 670 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm14589-201ENSMUST00000121640 727 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm6434-201ENSMUST00000163316 372 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm7426-201ENSMUST00000179046 404 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Mir6241-201ENSMUST00000184225 103 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm19185-201ENSMUST00000196365 643 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm5050-201ENSMUST00000197164 775 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm44023-201ENSMUST00000203710 469 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm44943-201ENSMUST00000207254 300 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm21041-201ENSMUST00000214829 823 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms