Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 D730003I15Rik-201ENSMUST00000139056 716 ntTSL 2 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Prss28-201ENSMUST00000015267 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm22037-201ENSMUST00000157280 296 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm23892-201ENSMUST00000158105 130 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm2666-201ENSMUST00000160587 891 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Mir5106-201ENSMUST00000174936 73 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm24269-201ENSMUST00000179216 77 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm9568-201ENSMUST00000182514 1008 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim35Q8C006 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm8115-201ENSMUST00000197137 736 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm7824-201ENSMUST00000198301 532 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm43243-201ENSMUST00000199964 278 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm7397-201ENSMUST00000208298 361 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm45275-201ENSMUST00000210057 365 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm45859-201ENSMUST00000212794 214 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Rps25-204ENSMUST00000216076 393 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 AC161117.2-201ENSMUST00000221908 451 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm7979-201ENSMUST00000223009 1025 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 AC156561.1-201ENSMUST00000224774 233 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 AC123665.2-201ENSMUST00000226636 432 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 CT571271.1-201ENSMUST00000227071 670 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm8054-201ENSMUST00000093411 483 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Rhox12-201ENSMUST00000096453 920 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Rdh12-202ENSMUST00000122227 1624 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm13535-201ENSMUST00000118714 1884 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trim35Q8C006 4930509G22Rik-201ENSMUST00000181206 2481 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Dusp18-202ENSMUST00000109996 2685 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm37887-201ENSMUST00000192752 2716 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm44423-201ENSMUST00000203746 3158 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Top3a-201ENSMUST00000002891 3741 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Rab6a-203ENSMUST00000107048 2617 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim35Q8C006 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm43313-201ENSMUST00000201398 2235 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Cep70-209ENSMUST00000191335 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Agbl4-201ENSMUST00000080744 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 AC107645.1-201ENSMUST00000228660 1810 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm45557-201ENSMUST00000210004 1651 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm33023-202ENSMUST00000212450 1571 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm6964-201ENSMUST00000117206 437 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm14940-201ENSMUST00000119309 495 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm11461-201ENSMUST00000119909 387 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm7158-201ENSMUST00000120079 903 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm13259-201ENSMUST00000120792 456 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm15959-201ENSMUST00000121724 368 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm11342-201ENSMUST00000147704 621 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm17097-201ENSMUST00000166414 714 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm25935-201ENSMUST00000178746 107 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm5313-201ENSMUST00000182893 987 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm4842-201ENSMUST00000183237 835 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm28304-201ENSMUST00000185977 312 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm29256-201ENSMUST00000189094 312 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm28484-201ENSMUST00000190606 312 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm37796-201ENSMUST00000195327 134 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm44320-201ENSMUST00000199276 86 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm44265-201ENSMUST00000203631 465 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm45910-201ENSMUST00000212493 1003 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Tubb3-202ENSMUST00000212743 776 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim35Q8C006 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim35Q8C006 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm25080-201ENSMUST00000082526 107 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm22571-201ENSMUST00000082984 70 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms