Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm21392-201ENSMUST00000182950 972 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm20813-201ENSMUST00000186646 705 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm28859-201ENSMUST00000186650 616 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm21617-201ENSMUST00000188297 691 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm43147-201ENSMUST00000196944 542 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm2860-201ENSMUST00000199226 707 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm19032-201ENSMUST00000208584 592 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm4270-201ENSMUST00000209666 406 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm19007-201ENSMUST00000217746 874 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm8290-201ENSMUST00000218202 477 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm8137-201ENSMUST00000218997 463 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm14865-201ENSMUST00000117523 494 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm14007-201ENSMUST00000118288 210 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm8644-201ENSMUST00000118619 596 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm12242-201ENSMUST00000118824 738 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm15923-201ENSMUST00000119300 1169 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm13604-201ENSMUST00000119332 482 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm12262-201ENSMUST00000119915 305 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm12313-201ENSMUST00000121347 421 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm11954-201ENSMUST00000121403 349 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm14038-201ENSMUST00000121500 807 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm12094-201ENSMUST00000121781 472 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm17022-201ENSMUST00000166415 922 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm20691-201ENSMUST00000176889 333 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm5473-201ENSMUST00000179326 642 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm21758-201ENSMUST00000179336 819 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Pea15b-201ENSMUST00000182806 387 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm27158-201ENSMUST00000183813 238 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm29647-201ENSMUST00000188795 666 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm28414-201ENSMUST00000190111 294 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm18775-201ENSMUST00000190763 586 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm28504-201ENSMUST00000190977 666 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm38373-201ENSMUST00000192042 288 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm31511-201ENSMUST00000193134 657 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm35843-201ENSMUST00000193716 666 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm38146-201ENSMUST00000194121 1293 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.51□□□□□ -1.37
Scaf4Q6PFF0 Gm45100-201ENSMUST00000209153 391 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms