Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.94□□□□□ -1.46
Foxc1Q61572 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Foxc1Q61572 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Foxc1Q61572 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm9105-201ENSMUST00000120160 1398 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 AC121942.3-201ENSMUST00000225768 1436 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm37210-201ENSMUST00000192484 2004 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm13331-201ENSMUST00000117500 448 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm15025-201ENSMUST00000118434 418 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm11558-201ENSMUST00000118454 459 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm14269-201ENSMUST00000120455 306 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm11498-201ENSMUST00000120660 949 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm9225-201ENSMUST00000121921 836 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm4246-201ENSMUST00000172822 216 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm26556-201ENSMUST00000180645 320 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Mir7060-201ENSMUST00000183486 137 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Mir6415-201ENSMUST00000184064 100 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Mir6919-201ENSMUST00000185146 62 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm8296-201ENSMUST00000185597 524 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm28546-201ENSMUST00000188221 615 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm28408-201ENSMUST00000191557 463 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm37455-201ENSMUST00000191993 529 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm38046-201ENSMUST00000192733 550 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm8686-201ENSMUST00000203028 388 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm45674-201ENSMUST00000210043 450 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm7546-202ENSMUST00000211354 275 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC5.93□□□□□ -1.46
Foxc1Q61572 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.93□□□□□ -1.46
Foxc1Q61572 AC132468.1-201ENSMUST00000224706 499 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Spats1-201ENSMUST00000024731 1160 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Foxc1Q61572 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Foxc1Q61572 Gm23679-201ENSMUST00000083161 119 ntBASIC5.93□□□□□ -1.46
Foxc1Q61572 n-R5s156-201ENSMUST00000083377 105 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms