Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm16016-201ENSMUST00000120831 550 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm15349-201ENSMUST00000121154 204 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm15275-201ENSMUST00000154752 347 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm22235-201ENSMUST00000157085 110 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm23903-201ENSMUST00000157566 131 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm23756-201ENSMUST00000157582 114 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm24735-201ENSMUST00000158859 118 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm24925-201ENSMUST00000178157 107 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm37727-201ENSMUST00000191637 819 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm37380-201ENSMUST00000193752 397 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm43383-201ENSMUST00000195981 469 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm42720-201ENSMUST00000196813 300 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm44225-201ENSMUST00000203582 186 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm7413-201ENSMUST00000219498 462 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm19233-201ENSMUST00000219772 936 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm18618-201ENSMUST00000222211 473 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm6990-201ENSMUST00000086830 348 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm22953-201ENSMUST00000116724 101 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm11553-201ENSMUST00000120682 240 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm23071-201ENSMUST00000158242 115 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm20128-201ENSMUST00000196189 417 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm43489-201ENSMUST00000196810 993 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC166830.1-201ENSMUST00000224201 533 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms