Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm23145-201ENSMUST00000178912 79 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Mir7211-201ENSMUST00000184071 63 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm28740-201ENSMUST00000186142 215 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm28724-201ENSMUST00000186149 625 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm37770-201ENSMUST00000192855 772 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm5338-201ENSMUST00000209530 639 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm6477-201ENSMUST00000217098 764 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm35619-201ENSMUST00000222548 600 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AV026068-220ENSMUST00000224153 1147 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm8526-201ENSMUST00000079153 475 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm16020-201ENSMUST00000084281 210 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm45887-201ENSMUST00000212672 2998 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Gm43581-201ENSMUST00000196766 2864 ntBASIC5.86□□□□□ -1.47
Col8a1Q00780 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col8a1Q00780 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Snord70-201ENSMUST00000104157 87 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Snora35-201ENSMUST00000104579 128 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15765-201ENSMUST00000118407 910 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15233-201ENSMUST00000118747 400 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15763-201ENSMUST00000120136 403 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm13991-201ENSMUST00000120190 648 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm6446-201ENSMUST00000120604 818 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm13578-201ENSMUST00000120849 590 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm13000-201ENSMUST00000120937 496 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm11797-201ENSMUST00000121336 754 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm14122-201ENSMUST00000122076 973 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm25807-201ENSMUST00000122783 305 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm24685-201ENSMUST00000157764 285 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm25435-201ENSMUST00000158277 267 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm26607-201ENSMUST00000180661 867 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Mir7220-201ENSMUST00000183978 60 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Mir7008-201ENSMUST00000184398 63 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm27219-201ENSMUST00000184633 742 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm37581-201ENSMUST00000192371 988 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms