Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.47□□□□□ -1.37
NcanP55066 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.47□□□□□ -1.37
NcanP55066 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
NcanP55066 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.47□□□□□ -1.37
NcanP55066 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
NcanP55066 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NcanP55066 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NcanP55066 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NcanP55066 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.46□□□□□ -1.37
NcanP55066 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NcanP55066 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.46□□□□□ -1.37
NcanP55066 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.46□□□□□ -1.38
NcanP55066 Gm24578-201ENSMUST00000103970 129 ntBASIC6.46□□□□□ -1.38
NcanP55066 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.46□□□□□ -1.38
NcanP55066 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm15171-201ENSMUST00000122191 334 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm15335-201ENSMUST00000122442 411 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.46□□□□□ -1.38
NcanP55066 Mir1963-201ENSMUST00000158594 59 ntBASIC6.46□□□□□ -1.38
NcanP55066 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm17934-201ENSMUST00000192818 422 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.46□□□□□ -1.38
NcanP55066 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.46□□□□□ -1.38
NcanP55066 Gm29755-201ENSMUST00000196976 948 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Gm44132-201ENSMUST00000205142 151 ntBASIC6.46□□□□□ -1.38
NcanP55066 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.46□□□□□ -1.38
NcanP55066 Gm45660-201ENSMUST00000210267 151 ntBASIC6.46□□□□□ -1.38
NcanP55066 AC129323.1-201ENSMUST00000216733 470 ntBASIC6.46□□□□□ -1.38
NcanP55066 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NcanP55066 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NcanP55066 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NcanP55066 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.46□□□□□ -1.38
NcanP55066 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.46□□□□□ -1.38
NcanP55066 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
NcanP55066 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NcanP55066 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NcanP55066 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
NcanP55066 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.46□□□□□ -1.38
NcanP55066 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NcanP55066 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.45□□□□□ -1.38
NcanP55066 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
NcanP55066 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Gm14539-201ENSMUST00000117527 174 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm15044-201ENSMUST00000120703 598 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.45□□□□□ -1.38
NcanP55066 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.45□□□□□ -1.38
NcanP55066 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Gm27834-201ENSMUST00000183427 125 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm28665-201ENSMUST00000189269 670 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm29160-201ENSMUST00000190094 699 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NcanP55066 Gm8826-201ENSMUST00000193161 948 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm43516-201ENSMUST00000196891 322 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm4714-201ENSMUST00000203395 279 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.45□□□□□ -1.38
NcanP55066 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm10709-201ENSMUST00000213318 480 ntBASIC6.45□□□□□ -1.38
NcanP55066 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.45□□□□□ -1.38
NcanP55066 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.45□□□□□ -1.38
NcanP55066 Zfp429-203ENSMUST00000224684 524 ntBASIC6.45□□□□□ -1.38
NcanP55066 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.45□□□□□ -1.38
NcanP55066 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NcanP55066 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NcanP55066 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms