Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Msh6P54276 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Msh6P54276 Mir1188-201ENSMUST00000116756 120 ntBASIC7.58□□□□□ -1.2
Msh6P54276 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm15335-201ENSMUST00000122442 411 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Gm25962-201ENSMUST00000157173 168 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm26172-201ENSMUST00000158421 134 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm24735-201ENSMUST00000158859 118 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Msh6P54276 Gm27985-201ENSMUST00000185112 378 ntBASIC7.58□□□□□ -1.2
Msh6P54276 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC7.58□□□□□ -1.2
Msh6P54276 Gm43157-201ENSMUST00000198223 412 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm43554-201ENSMUST00000199987 186 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm7181-201ENSMUST00000202197 434 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm18325-201ENSMUST00000203228 835 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm44683-201ENSMUST00000209088 484 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.58□□□□□ -1.2
Msh6P54276 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.58□□□□□ -1.2
Msh6P54276 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Msh6P54276 n-R5s46-201ENSMUST00000083960 116 ntBASIC7.58□□□□□ -1.2
Msh6P54276 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Msh6P54276 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Msh6P54276 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Msh6P54276 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Msh6P54276 Lipe-203ENSMUST00000105177 1251 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Msh6P54276 Gm16200-201ENSMUST00000120385 331 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm16270-201ENSMUST00000160327 3238 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Gm18969-201ENSMUST00000189423 730 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm28188-201ENSMUST00000190483 236 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm18427-201ENSMUST00000195422 515 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm2287-202ENSMUST00000199619 1000 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Gm44053-201ENSMUST00000203364 929 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Msh6P54276 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.57□□□□□ -1.2
Msh6P54276 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.57□□□□□ -1.2
Msh6P54276 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Mir188-201ENSMUST00000083464 68 ntBASIC7.57□□□□□ -1.2
Msh6P54276 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Msh6P54276 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Msh6P54276 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Gm12303-201ENSMUST00000119506 673 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm11990-201ENSMUST00000121505 897 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm11894-201ENSMUST00000121579 328 ntBASIC7.56□□□□□ -1.2
Msh6P54276 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Gm11197-201ENSMUST00000145158 839 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.56□□□□□ -1.2
Msh6P54276 Gm18343-201ENSMUST00000172802 604 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm20480-201ENSMUST00000173953 250 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Gm29596-201ENSMUST00000185710 385 ntBASIC7.56□□□□□ -1.2
Msh6P54276 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC7.56□□□□□ -1.2
Msh6P54276 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms