Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm14836-201ENSMUST00000118567 471 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm13740-201ENSMUST00000120590 310 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm23954-201ENSMUST00000157213 353 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm23894-201ENSMUST00000158107 313 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.79□□□□□ -1.48
Sox3P53784 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox3P53784 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox3P53784 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm7825-201ENSMUST00000204046 416 ntBASIC5.79□□□□□ -1.48
Sox3P53784 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Gm17988-201ENSMUST00000208796 535 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm19256-201ENSMUST00000218550 231 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm36262-201ENSMUST00000223274 499 ntBASIC5.79□□□□□ -1.48
Sox3P53784 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Sox3P53784 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox3P53784 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Sox3P53784 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.79□□□□□ -1.48
Sox3P53784 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Sox3P53784 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox3P53784 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox3P53784 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.78□□□□□ -1.48
Sox3P53784 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox3P53784 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm22952-201ENSMUST00000116720 120 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm11925-201ENSMUST00000121375 535 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox3P53784 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox3P53784 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.78□□□□□ -1.48
Sox3P53784 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Gm23071-201ENSMUST00000158242 115 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm23617-201ENSMUST00000175410 95 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Gm37024-201ENSMUST00000192224 868 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Gm37511-201ENSMUST00000192901 294 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm18325-201ENSMUST00000203228 835 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.78□□□□□ -1.48
Sox3P53784 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm6477-201ENSMUST00000217098 764 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm18628-201ENSMUST00000220584 475 ntBASIC5.78□□□□□ -1.48
Sox3P53784 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Gm40598-201ENSMUST00000222953 547 ntBASIC5.78□□□□□ -1.48
Sox3P53784 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.78□□□□□ -1.48
Sox3P53784 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox3P53784 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.78□□□□□ -1.48
Sox3P53784 Mir331-201ENSMUST00000083673 96 ntBASIC5.78□□□□□ -1.48
Sox3P53784 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
Sox3P53784 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox3P53784 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox3P53784 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox3P53784 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms