Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC173482.2-201ENSMUST00000224044 750 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC154484.1-201ENSMUST00000227311 771 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Shmt1P50431 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm15500-201ENSMUST00000071523 894 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Shmt1P50431 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.62□□□□□ -1.35
Shmt1P50431 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm24434-201ENSMUST00000104081 132 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm24340-201ENSMUST00000104208 97 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Mup-ps14-201ENSMUST00000118437 532 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm37463-201ENSMUST00000193819 796 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm29778-201ENSMUST00000201667 466 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm2996-201ENSMUST00000211398 537 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm9293-201ENSMUST00000223096 306 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm8256-203ENSMUST00000228692 591 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Shmt1P50431 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.62□□□□□ -1.35
Shmt1P50431 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Shmt1P50431 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Shmt1P50431 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Shmt1P50431 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm2288-201ENSMUST00000118560 638 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm13818-201ENSMUST00000119441 511 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8051-201ENSMUST00000120464 466 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm12399-201ENSMUST00000121475 446 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms