Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm18444-201ENSMUST00000191239 629 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm37581-201ENSMUST00000192371 988 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm37809-201ENSMUST00000195050 931 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm45724-201ENSMUST00000213031 420 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm19186-201ENSMUST00000219922 333 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Pramel-201ENSMUST00000118979 1383 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm12077-201ENSMUST00000117049 364 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm14679-201ENSMUST00000121536 722 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm15237-201ENSMUST00000122104 469 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm25826-201ENSMUST00000157090 137 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm24767-201ENSMUST00000158509 95 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm17048-201ENSMUST00000179266 847 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm5735-201ENSMUST00000207053 167 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Tnfsf4P43488 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms