Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm24359-201ENSMUST00000158418 221 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm24767-201ENSMUST00000158509 95 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm16112-201ENSMUST00000159075 382 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm20480-201ENSMUST00000173953 250 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm22569-201ENSMUST00000175545 124 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm27679-201ENSMUST00000184612 84 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm43148-201ENSMUST00000198237 520 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm38670-201ENSMUST00000199248 77 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm5318-201ENSMUST00000205249 406 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.73□□□□□ -1.49
Cdx2P43241 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx2P43241 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm7768-201ENSMUST00000222988 597 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Cdx2P43241 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx2P43241 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Cdx2P43241 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdx2P43241 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdx2P43241 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm18343-201ENSMUST00000172802 604 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm5430-201ENSMUST00000182525 915 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm29813-201ENSMUST00000195856 447 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm32158-201ENSMUST00000200135 404 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm45777-201ENSMUST00000213009 301 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Gm10709-201ENSMUST00000213318 480 ntBASIC5.72□□□□□ -1.49
Cdx2P43241 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx2P43241 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx2P43241 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx2P43241 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.72□□□□□ -1.49
Cdx2P43241 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx2P43241 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx2P43241 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx2P43241 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx2P43241 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx2P43241 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.71□□□□□ -1.49
Cdx2P43241 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdx2P43241 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm23485-201ENSMUST00000104181 155 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm13770-201ENSMUST00000117149 305 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm15531-201ENSMUST00000118062 252 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm12115-201ENSMUST00000119969 447 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm12293-201ENSMUST00000121898 590 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm25826-201ENSMUST00000157090 137 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm17142-201ENSMUST00000164933 645 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm27985-201ENSMUST00000185112 378 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm18407-201ENSMUST00000192126 790 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx2P43241 Gm43724-201ENSMUST00000197516 226 ntBASIC5.71□□□□□ -1.5
Cdx2P43241 Gm8039-201ENSMUST00000204758 712 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms