Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.02□□□□□ -1.45
HttP42859 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.02□□□□□ -1.45
HttP42859 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.02□□□□□ -1.45
HttP42859 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm7079-201ENSMUST00000119726 171 ntBASIC6.02□□□□□ -1.45
HttP42859 Gm6175-201ENSMUST00000121351 400 ntBASIC6.02□□□□□ -1.45
HttP42859 Gm22204-201ENSMUST00000122654 327 ntBASIC6.02□□□□□ -1.45
HttP42859 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm28116-201ENSMUST00000189064 387 ntBASIC6.02□□□□□ -1.45
HttP42859 Gm17951-201ENSMUST00000198536 496 ntBASIC6.02□□□□□ -1.45
HttP42859 CT573086.3-201ENSMUST00000228762 594 ntBASIC6.02□□□□□ -1.45
HttP42859 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HttP42859 Gm4963-201ENSMUST00000072718 378 ntBASIC6.02□□□□□ -1.45
HttP42859 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.02□□□□□ -1.45
HttP42859 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
HttP42859 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HttP42859 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.02□□□□□ -1.45
HttP42859 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HttP42859 Gm12807-201ENSMUST00000121546 962 ntBASIC6.01□□□□□ -1.45
HttP42859 Gm27834-201ENSMUST00000183427 125 ntBASIC6.01□□□□□ -1.45
HttP42859 Gm5735-201ENSMUST00000207053 167 ntBASIC6.01□□□□□ -1.45
HttP42859 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.01□□□□□ -1.45
HttP42859 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.01□□□□□ -1.45
HttP42859 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.01□□□□□ -1.45
HttP42859 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Gm38187-201ENSMUST00000195609 4709 ntBASIC6.01□□□□□ -1.45
HttP42859 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Gm26362-201ENSMUST00000158865 315 ntBASIC6.01□□□□□ -1.45
HttP42859 Gm8214-201ENSMUST00000172123 351 ntBASIC6.01□□□□□ -1.45
HttP42859 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.01□□□□□ -1.45
HttP42859 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
HttP42859 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.01□□□□□ -1.45
HttP42859 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
HttP42859 Gm6366-201ENSMUST00000198766 826 ntBASIC6.01□□□□□ -1.45
HttP42859 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.01□□□□□ -1.45
HttP42859 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.01□□□□□ -1.45
HttP42859 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HttP42859 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
HttP42859 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6□□□□□ -1.45
HttP42859 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Dopey2-207ENSMUST00000227156 7340 ntBASIC6□□□□□ -1.45
HttP42859 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Gm22493-201ENSMUST00000104494 132 ntBASIC6□□□□□ -1.45
HttP42859 Gm15096-201ENSMUST00000121918 878 ntBASIC6□□□□□ -1.45
HttP42859 Gm24745-201ENSMUST00000157840 85 ntBASIC6□□□□□ -1.45
HttP42859 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6□□□□□ -1.45
HttP42859 Gm4412-201ENSMUST00000186660 433 ntBASIC6□□□□□ -1.45
HttP42859 Gm29086-201ENSMUST00000186774 222 ntBASIC6□□□□□ -1.45
HttP42859 Gm29085-201ENSMUST00000187108 225 ntBASIC6□□□□□ -1.45
HttP42859 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6□□□□□ -1.45
HttP42859 Gm6070-201ENSMUST00000207275 419 ntBASIC6□□□□□ -1.45
HttP42859 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
HttP42859 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms