Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm5418-201ENSMUST00000206932 528 ntBASIC7.05□□□□□ -1.28
Traf1P39428 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm7802-201ENSMUST00000216464 262 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Gm2614-201ENSMUST00000223227 403 ntBASIC7.05□□□□□ -1.28
Traf1P39428 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Traf1P39428 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Traf1P39428 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Traf1P39428 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.05□□□□□ -1.28
Traf1P39428 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Traf1P39428 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC7.05□□□□□ -1.28
Traf1P39428 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.04□□□□□ -1.28
Traf1P39428 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Traf1P39428 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm12677-201ENSMUST00000118668 426 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm12396-201ENSMUST00000121600 306 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm24719-201ENSMUST00000157520 110 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm23408-201ENSMUST00000158523 265 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Gm38181-201ENSMUST00000181357 720 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm27219-201ENSMUST00000184633 742 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm29111-201ENSMUST00000188823 696 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm28584-201ENSMUST00000191489 696 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm38138-201ENSMUST00000193274 696 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm37991-201ENSMUST00000194297 696 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm44382-201ENSMUST00000198683 122 ntBASIC7.04□□□□□ -1.28
Traf1P39428 AC134333.1-201ENSMUST00000204536 944 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Gm5318-201ENSMUST00000205249 406 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Traf1P39428 Gm37703-201ENSMUST00000192292 1784 ntBASIC7.04□□□□□ -1.28
Traf1P39428 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Traf1P39428 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Traf1P39428 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.03□□□□□ -1.28
Traf1P39428 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 Gm22370-201ENSMUST00000102422 83 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm13641-201ENSMUST00000117993 473 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm12985-201ENSMUST00000118376 183 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm13338-201ENSMUST00000120235 361 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm13493-201ENSMUST00000120318 493 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm11761-201ENSMUST00000121392 445 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm22636-201ENSMUST00000158142 275 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm16557-201ENSMUST00000159182 191 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm22932-201ENSMUST00000175510 72 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.03□□□□□ -1.28
Traf1P39428 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 Gm27960-201ENSMUST00000183445 184 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Mir7685-201ENSMUST00000183555 62 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm37838-201ENSMUST00000194464 312 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm44360-201ENSMUST00000200081 82 ntBASIC7.03□□□□□ -1.28
Traf1P39428 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.03□□□□□ -1.28
Traf1P39428 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Traf1P39428 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms