Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm19231-201ENSMUST00000193212 830 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm37681-201ENSMUST00000193880 727 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.69□□□□□ -1.34
Col2a1P28481 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm19174-201ENSMUST00000216944 956 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm7887-201ENSMUST00000056948 537 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm24525-201ENSMUST00000082917 151 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Col2a1P28481 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm25422-201ENSMUST00000104219 129 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Gm15715-201ENSMUST00000118032 283 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Gm12650-201ENSMUST00000121966 258 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Gm22106-201ENSMUST00000122544 127 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm17511-201ENSMUST00000172206 342 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm27225-201ENSMUST00000183833 557 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm43436-201ENSMUST00000199308 147 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col2a1P28481 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Col2a1P28481 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col2a1P28481 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.68□□□□□ -1.34
Col2a1P28481 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col2a1P28481 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.68□□□□□ -1.34
Col2a1P28481 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm22596-201ENSMUST00000157601 316 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Gm24236-201ENSMUST00000157794 134 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Gm24103-201ENSMUST00000174930 77 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm43078-201ENSMUST00000197222 168 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm43554-201ENSMUST00000199987 186 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Gm7990-201ENSMUST00000212126 593 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Gm18705-201ENSMUST00000215985 913 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm6104-201ENSMUST00000078030 603 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col2a1P28481 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.67□□□□□ -1.34
Col2a1P28481 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col2a1P28481 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col2a1P28481 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms