Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25757-201ENSMUST00000103986 123 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Sdc1P18828 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm7927-201ENSMUST00000118818 880 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm11699-201ENSMUST00000119016 401 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm9208-201ENSMUST00000120468 948 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm4789-201ENSMUST00000121708 1216 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC4.76□□□□□ -1.65
Sdc1P18828 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm25550-201ENSMUST00000158079 128 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sdc1P18828 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.76□□□□□ -1.65
Sdc1P18828 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm37774-201ENSMUST00000194401 245 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm38360-201ENSMUST00000195130 454 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm37585-201ENSMUST00000195440 280 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm44361-201ENSMUST00000197960 94 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm3321-201ENSMUST00000200603 1129 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm3912-203ENSMUST00000211024 367 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 AC124184.1-201ENSMUST00000218167 283 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 AC157650.2-201ENSMUST00000224666 328 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 AC131586.4-201ENSMUST00000228424 668 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sdc1P18828 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sdc1P18828 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Gm24029-201ENSMUST00000083928 143 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm18880-201ENSMUST00000223333 1541 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC4.76□□□□□ -1.65
Sdc1P18828 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm43128-201ENSMUST00000202212 1621 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm15366-201ENSMUST00000118433 1019 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm12850-201ENSMUST00000119210 436 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm12110-201ENSMUST00000121601 579 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC4.75□□□□□ -1.65
Sdc1P18828 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC4.75□□□□□ -1.65
Sdc1P18828 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm23894-201ENSMUST00000158107 313 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm22326-201ENSMUST00000158897 351 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm9294-201ENSMUST00000165198 789 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm24561-201ENSMUST00000175182 95 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm26179-201ENSMUST00000177723 132 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm4832-201ENSMUST00000182679 399 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm28023-201ENSMUST00000184556 60 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm27825-201ENSMUST00000184586 60 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm28975-201ENSMUST00000186412 686 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm28573-201ENSMUST00000187821 380 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm28400-201ENSMUST00000191332 380 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm18407-201ENSMUST00000192126 790 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms