Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43516-201ENSMUST00000196891 322 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm43655-201ENSMUST00000197367 222 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm40319-201ENSMUST00000199785 481 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm44295-201ENSMUST00000203805 437 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm45596-201ENSMUST00000209279 434 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm45299-201ENSMUST00000210199 420 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm18258-201ENSMUST00000210413 542 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm9604-201ENSMUST00000211175 433 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm45506-201ENSMUST00000211620 280 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm45814-201ENSMUST00000212646 775 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.08□□□□□ -1.44
Hoxd3P09027 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxd3P09027 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm24696-201ENSMUST00000083878 134 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm37334-201ENSMUST00000192325 2938 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm22019-201ENSMUST00000104359 96 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm15076-201ENSMUST00000117076 474 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm14016-201ENSMUST00000119095 486 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm14046-201ENSMUST00000119389 509 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm15034-201ENSMUST00000120043 349 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm14847-201ENSMUST00000121978 519 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm11344-201ENSMUST00000122011 335 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm22236-201ENSMUST00000157093 106 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm23663-201ENSMUST00000158045 80 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm23027-201ENSMUST00000158771 158 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm20430-201ENSMUST00000172474 207 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm20519-201ENSMUST00000173684 359 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm24415-201ENSMUST00000180218 107 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.07□□□□□ -1.44
Hoxd3P09027 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm36891-201ENSMUST00000191995 655 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms