Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC4.29□□□□□ -1.72
TcraP01849 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Gm22604-201ENSMUST00000157604 311 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm26321-201ENSMUST00000157740 242 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm24103-201ENSMUST00000174930 77 ntBASIC4.29□□□□□ -1.72
TcraP01849 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TcraP01849 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TcraP01849 Gm28023-201ENSMUST00000184556 60 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm27825-201ENSMUST00000184586 60 ntBASIC4.29□□□□□ -1.72
TcraP01849 Mir7005-201ENSMUST00000185089 69 ntBASIC4.29□□□□□ -1.72
TcraP01849 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm19653-201ENSMUST00000204326 1039 ntBASIC4.29□□□□□ -1.72
TcraP01849 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm45700-201ENSMUST00000205866 347 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm5324-201ENSMUST00000208115 476 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm18559-201ENSMUST00000208249 604 ntBASIC4.29□□□□□ -1.72
TcraP01849 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Gm18996-201ENSMUST00000214851 755 ntBASIC4.29□□□□□ -1.72
TcraP01849 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TcraP01849 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Gm8607-201ENSMUST00000221864 431 ntBASIC4.29□□□□□ -1.72
TcraP01849 AC107663.1-201ENSMUST00000224257 468 ntBASIC4.29□□□□□ -1.72
TcraP01849 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TcraP01849 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.29□□□□□ -1.72
TcraP01849 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.29□□□□□ -1.72
TcraP01849 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC4.29□□□□□ -1.72
TcraP01849 AC130831.1-201ENSMUST00000224546 1474 ntBASIC4.29□□□□□ -1.72
TcraP01849 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.29□□□□□ -1.72
TcraP01849 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TcraP01849 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TcraP01849 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.28□□□□□ -1.72
TcraP01849 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.28□□□□□ -1.72
TcraP01849 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.28□□□□□ -1.72
TcraP01849 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TcraP01849 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TcraP01849 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Gm12573-201ENSMUST00000118158 286 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm13818-201ENSMUST00000119441 511 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm16112-201ENSMUST00000159075 382 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm7289-201ENSMUST00000168993 734 ntBASIC4.28□□□□□ -1.72
TcraP01849 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm23631-201ENSMUST00000175291 123 ntBASIC4.28□□□□□ -1.72
TcraP01849 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm28885-201ENSMUST00000185615 563 ntBASIC4.28□□□□□ -1.72
TcraP01849 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Gm37682-201ENSMUST00000191776 522 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm35013-201ENSMUST00000197218 832 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm43467-201ENSMUST00000197441 437 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm4860-201ENSMUST00000200368 454 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm3549-201ENSMUST00000203873 794 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 Gm45626-201ENSMUST00000210093 361 ntBASIC4.28□□□□□ -1.72
TcraP01849 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Gm4556-201ENSMUST00000217808 355 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.28□□□□□ -1.72
TcraP01849 Gm46364-201ENSMUST00000218548 319 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm19186-201ENSMUST00000219922 333 ntBASIC4.28□□□□□ -1.72
TcraP01849 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC4.28□□□□□ -1.72
TcraP01849 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TcraP01849 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms