Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm43417-201ENSMUST00000201586 5207 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm11774-201ENSMUST00000118601 293 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm6061-201ENSMUST00000175860 492 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm24792-201ENSMUST00000104286 128 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm34272-201ENSMUST00000208886 253 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a3E9PWQ3 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm14769-201ENSMUST00000118590 432 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm25176-201ENSMUST00000122640 125 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm18752-201ENSMUST00000192876 608 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm9173-201ENSMUST00000198054 400 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm23501-201ENSMUST00000157744 256 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm23796-201ENSMUST00000084011 160 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a3E9PWQ3 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms