Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm15715-201ENSMUST00000118032 283 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm15781-201ENSMUST00000120216 323 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 n-R5s19-201ENSMUST00000122793 120 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm17137-202ENSMUST00000165729 957 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm9671-201ENSMUST00000171502 547 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm44312-201ENSMUST00000203536 469 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Api5-ps-201ENSMUST00000206607 577 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm45156-201ENSMUST00000207255 439 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm18467-201ENSMUST00000208805 434 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 AC131029.2-201ENSMUST00000226696 628 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 AC170810.1-201ENSMUST00000228267 672 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 AC118250.1-201ENSMUST00000228569 875 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm45413-201ENSMUST00000210389 3538 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm44530-201ENSMUST00000207920 3559 ntBASIC6□□□□□ -1.45
Cldn3Q9Z0G9 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Mir449c-201ENSMUST00000102192 109 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm23440-201ENSMUST00000104299 130 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm14659-201ENSMUST00000117667 843 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm13772-201ENSMUST00000118431 317 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm23995-201ENSMUST00000158060 129 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm24741-201ENSMUST00000158857 106 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm10177-201ENSMUST00000160052 444 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm7952-201ENSMUST00000180540 984 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm37341-201ENSMUST00000194680 371 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm7181-201ENSMUST00000202197 434 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm19182-201ENSMUST00000207139 577 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.99□□□□□ -1.45
Cldn3Q9Z0G9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm6744-201ENSMUST00000119303 543 ntBASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm13531-201ENSMUST00000121893 543 ntBASIC5.98□□□□□ -1.45
Cldn3Q9Z0G9 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms