Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm10705-201ENSMUST00000098980 461 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm25564-201ENSMUST00000104604 132 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm13835-201ENSMUST00000118459 685 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm14294-201ENSMUST00000119749 751 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm23430-201ENSMUST00000122490 314 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm26346-201ENSMUST00000157525 329 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm23553-201ENSMUST00000157817 295 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm10410-201ENSMUST00000180138 384 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm26898-201ENSMUST00000181678 384 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Mir7082-201ENSMUST00000183526 92 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm37265-201ENSMUST00000191698 885 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm43561-201ENSMUST00000199866 448 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm44809-201ENSMUST00000208305 993 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Mir3068-201ENSMUST00000083004 136 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim3Q9R1R2 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm16016-201ENSMUST00000120831 550 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm14587-201ENSMUST00000121714 658 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm18953-201ENSMUST00000175694 300 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim3Q9R1R2 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms