Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm12438-201ENSMUST00000122034 336 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm21654-201ENSMUST00000188086 691 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm38185-201ENSMUST00000193195 694 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm3544-201ENSMUST00000196129 305 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm9506-201ENSMUST00000118516 320 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm7927-201ENSMUST00000118818 880 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm12262-201ENSMUST00000119915 305 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm26353-201ENSMUST00000158224 255 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm3344-201ENSMUST00000169610 603 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm24103-201ENSMUST00000174930 77 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm43779-201ENSMUST00000196691 829 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Lima1Q9ERG0 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm8501-201ENSMUST00000117684 432 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm6884-201ENSMUST00000119318 615 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm12396-201ENSMUST00000121600 306 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm13669-201ENSMUST00000122366 457 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Snora47-201ENSMUST00000157483 138 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm27037-201ENSMUST00000182270 960 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm37784-201ENSMUST00000193233 189 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm5694-201ENSMUST00000195648 641 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm5055-201ENSMUST00000215697 581 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm8412-201ENSMUST00000077493 440 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Gm7808-201ENSMUST00000082002 387 ntBASIC5.76□□□□□ -1.49
Lima1Q9ERG0 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms