Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm12937-201ENSMUST00000118333 448 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm22276-201ENSMUST00000122469 129 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm22094-201ENSMUST00000158976 117 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm18833-201ENSMUST00000173218 862 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm20778-201ENSMUST00000178524 627 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Mir7674-201ENSMUST00000184964 63 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm43382-201ENSMUST00000198954 838 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm18839-201ENSMUST00000204292 670 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm18940-201ENSMUST00000222518 871 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 AV026068-220ENSMUST00000224153 1147 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm8256-203ENSMUST00000228692 591 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smc1aQ9CU62 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm12442-201ENSMUST00000118372 338 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm24719-201ENSMUST00000157520 110 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm17046-201ENSMUST00000168078 850 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm20401-201ENSMUST00000173717 212 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm5947-201ENSMUST00000179156 714 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm5645-201ENSMUST00000179597 714 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Mir6362-201ENSMUST00000184329 107 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm2225-201ENSMUST00000209570 377 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 CT009754.4-201ENSMUST00000221430 565 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 636.8 ms