Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm43655-201ENSMUST00000197367 222 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm42776-201ENSMUST00000198031 406 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm44316-201ENSMUST00000199274 97 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm44582-201ENSMUST00000209125 445 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm16007-201ENSMUST00000117837 286 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm7927-201ENSMUST00000118818 880 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm14863-201ENSMUST00000119648 307 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm12369-201ENSMUST00000121343 942 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm16330-201ENSMUST00000128324 297 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm25281-201ENSMUST00000157270 104 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Mir1960-201ENSMUST00000157488 78 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm18407-201ENSMUST00000192126 790 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm37270-201ENSMUST00000194277 330 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm37774-201ENSMUST00000194401 245 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm45628-201ENSMUST00000210849 274 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm45733-201ENSMUST00000212988 437 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.59□□□□□ -1.51
Use1Q9CQ56 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Use1Q9CQ56 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Use1Q9CQ56 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.59□□□□□ -1.52
Use1Q9CQ56 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Use1Q9CQ56 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Use1Q9CQ56 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Use1Q9CQ56 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Use1Q9CQ56 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm13770-201ENSMUST00000117149 305 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm12713-201ENSMUST00000118404 764 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm6654-201ENSMUST00000118950 348 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm14489-201ENSMUST00000120868 901 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm15801-201ENSMUST00000120920 522 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm8783-201ENSMUST00000159764 522 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm20561-201ENSMUST00000188131 292 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms