Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh23Q99PF4 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm20480-201ENSMUST00000173953 250 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm29124-201ENSMUST00000186576 452 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm23972-201ENSMUST00000083322 165 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm15670-201ENSMUST00000117740 447 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm15803-201ENSMUST00000120118 394 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm11622-201ENSMUST00000120525 691 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm14679-201ENSMUST00000121536 722 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Zakit-201ENSMUST00000157677 308 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm18591-201ENSMUST00000220568 763 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Cdh23Q99PF4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm11318-201ENSMUST00000118640 961 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm4234-201ENSMUST00000119747 714 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm26153-201ENSMUST00000157433 127 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm14755-201ENSMUST00000118037 384 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm13213-201ENSMUST00000119668 474 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm12466-201ENSMUST00000121199 620 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm3362-201ENSMUST00000148102 466 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm8264-201ENSMUST00000217801 465 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm8158-201ENSMUST00000219220 465 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm8112-201ENSMUST00000219637 465 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm7045-201ENSMUST00000221466 605 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm37310-201ENSMUST00000195237 2968 ntBASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdh23Q99PF4 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms