Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm11445-201ENSMUST00000119101 532 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm12813-201ENSMUST00000119615 902 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm15181-201ENSMUST00000120142 177 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Mir1960-201ENSMUST00000157488 78 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm3544-201ENSMUST00000196129 305 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm29736-201ENSMUST00000198189 385 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43906-201ENSMUST00000203194 906 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43895-201ENSMUST00000203219 855 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm24041-201ENSMUST00000083115 156 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm7927-201ENSMUST00000118818 880 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm12396-201ENSMUST00000121600 306 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm22915-201ENSMUST00000157615 136 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm18407-201ENSMUST00000192126 790 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm8412-201ENSMUST00000077493 440 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdk5rap3Q99LM2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm14863-201ENSMUST00000119648 307 ntBASIC6.17□□□□□ -1.42
Cdk5rap3Q99LM2 Gm13593-201ENSMUST00000121329 692 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms