Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm22952-201ENSMUST00000116720 120 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm11256-201ENSMUST00000118109 829 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm12099-201ENSMUST00000118660 750 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm6744-201ENSMUST00000119303 543 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm15164-201ENSMUST00000122203 271 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm17223-201ENSMUST00000171413 481 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm27004-201ENSMUST00000183300 727 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm29161-201ENSMUST00000188250 699 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm42776-201ENSMUST00000198031 406 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm17834-201ENSMUST00000204322 891 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm24200-201ENSMUST00000082955 157 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lsm1Q8VC85 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.72□□□□□ -1.49
Lsm1Q8VC85 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Lsm1Q8VC85 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Lsm1Q8VC85 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Lsm1Q8VC85 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lsm1Q8VC85 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lsm1Q8VC85 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm13770-201ENSMUST00000117149 305 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm9506-201ENSMUST00000118516 320 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm13702-201ENSMUST00000118542 825 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm16074-201ENSMUST00000119524 444 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm14489-201ENSMUST00000120868 901 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Mir1953-201ENSMUST00000157866 89 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm29592-201ENSMUST00000189434 370 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm18427-201ENSMUST00000195422 515 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm7351-201ENSMUST00000210745 580 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm45628-201ENSMUST00000210849 274 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm10095-201ENSMUST00000222765 483 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms