Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm9973-202ENSMUST00000220926 166 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm28392-201ENSMUST00000077630 393 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm24036-201ENSMUST00000082868 156 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.14□□□□□ -1.43
Clrn1Q8K445 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clrn1Q8K445 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm6913-201ENSMUST00000100019 348 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm24790-201ENSMUST00000104285 132 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm15186-201ENSMUST00000119345 563 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm11746-201ENSMUST00000119843 821 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm7571-201ENSMUST00000120252 927 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm11545-201ENSMUST00000146507 375 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm2930-201ENSMUST00000170403 474 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm8993-201ENSMUST00000182182 983 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm28023-201ENSMUST00000184556 60 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm27825-201ENSMUST00000184586 60 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm37581-201ENSMUST00000192371 988 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm37883-201ENSMUST00000194970 725 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm7452-201ENSMUST00000200764 788 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm42799-201ENSMUST00000201331 328 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm45626-201ENSMUST00000210093 361 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm45734-201ENSMUST00000211916 411 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm7119-201ENSMUST00000221345 695 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm22864-201ENSMUST00000083950 130 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms