Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm9836-201ENSMUST00000117132 216 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm13207-201ENSMUST00000119862 773 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm12222-201ENSMUST00000121368 260 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm25047-201ENSMUST00000122667 104 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm23884-201ENSMUST00000122687 294 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm3757-201ENSMUST00000125878 675 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm4660-201ENSMUST00000131499 403 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm12833-201ENSMUST00000136112 477 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm15279-201ENSMUST00000155593 288 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Mir1960-201ENSMUST00000157488 78 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm24435-201ENSMUST00000157886 110 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm21959-201ENSMUST00000178439 452 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm27602-201ENSMUST00000183861 111 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm8506-201ENSMUST00000186661 829 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm8454-201ENSMUST00000196980 811 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm5853-201ENSMUST00000197183 632 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CopaQ8CIE6 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Gm33312-201ENSMUST00000222443 332 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.4□□□□□ -1.38
CopaQ8CIE6 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
CopaQ8CIE6 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CopaQ8CIE6 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CopaQ8CIE6 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CopaQ8CIE6 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CopaQ8CIE6 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.4□□□□□ -1.39
CopaQ8CIE6 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.4□□□□□ -1.39
CopaQ8CIE6 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CopaQ8CIE6 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.4□□□□□ -1.39
CopaQ8CIE6 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.4□□□□□ -1.39
CopaQ8CIE6 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Snora35-201ENSMUST00000104579 128 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm14580-201ENSMUST00000119122 718 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm7058-201ENSMUST00000119209 902 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm13338-201ENSMUST00000120235 361 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm12229-201ENSMUST00000120487 468 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm7212-201ENSMUST00000120817 348 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm6081-201ENSMUST00000134472 489 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm25374-201ENSMUST00000158158 101 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm17223-201ENSMUST00000171413 481 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm22701-201ENSMUST00000175371 291 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm18700-201ENSMUST00000185791 553 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm28614-201ENSMUST00000186483 458 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm18805-201ENSMUST00000206872 655 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.39□□□□□ -1.39
CopaQ8CIE6 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Gm17917-201ENSMUST00000218561 953 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.39□□□□□ -1.39
CopaQ8CIE6 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms