Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm11677-201ENSMUST00000121349 977 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm23233-201ENSMUST00000157301 137 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm23965-201ENSMUST00000157969 142 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm5430-201ENSMUST00000182525 915 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm5334-201ENSMUST00000187472 720 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm6520-201ENSMUST00000200636 410 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm8667-201ENSMUST00000211112 449 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
Col6a6Q8C6K9 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm13866-201ENSMUST00000118901 968 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm6067-201ENSMUST00000121648 491 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm8480-201ENSMUST00000190350 698 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm37681-201ENSMUST00000193880 727 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Col6a6Q8C6K9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm7335-201ENSMUST00000172475 373 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm38015-201ENSMUST00000193048 188 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm44330-201ENSMUST00000200106 143 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm44132-201ENSMUST00000205142 151 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm45196-201ENSMUST00000206751 825 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a6Q8C6K9 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm25422-201ENSMUST00000104219 129 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm22355-201ENSMUST00000175531 96 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm8669-201ENSMUST00000183839 945 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 287.4 ms