Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43392-201ENSMUST00000196560 434 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm44312-201ENSMUST00000203536 469 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm45008-201ENSMUST00000206420 493 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm23737-201ENSMUST00000082547 159 ntBASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trub1Q8C0D0 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm15400-201ENSMUST00000118944 601 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm14679-201ENSMUST00000121536 722 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm12488-201ENSMUST00000122449 499 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm28527-201ENSMUST00000185210 297 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm37191-201ENSMUST00000193346 388 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm43929-201ENSMUST00000203025 409 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm19116-201ENSMUST00000218592 642 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm18413-201ENSMUST00000221573 655 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm23686-201ENSMUST00000083241 164 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trub1Q8C0D0 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trub1Q8C0D0 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms