Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm13451-201ENSMUST00000117649 592 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm12901-201ENSMUST00000118690 532 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm6427-201ENSMUST00000118721 979 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm23669-201ENSMUST00000157470 128 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Mir3095-201ENSMUST00000175552 87 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 AC159308.1-201ENSMUST00000216615 1351 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm37531-201ENSMUST00000191628 5415 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm24692-201ENSMUST00000157761 146 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm26211-201ENSMUST00000158578 129 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm36999-201ENSMUST00000192756 1046 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm37716-201ENSMUST00000193553 947 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 AC154417.1-201ENSMUST00000223876 476 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm5594-201ENSMUST00000172712 1429 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.29□□□□□ -1.08
Usp47Q8BY87 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp47Q8BY87 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp47Q8BY87 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Dcdc5-202ENSMUST00000122388 4957 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm12482-201ENSMUST00000120435 630 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm20453-201ENSMUST00000173968 226 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Ighv3-2-201ENSMUST00000191842 349 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm42646-201ENSMUST00000202233 914 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 n-R5s215-201ENSMUST00000082480 104 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 n-R5s204-201ENSMUST00000082972 119 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm38276-201ENSMUST00000192446 1343 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Gm44586-201ENSMUST00000207166 2737 ntBASIC8.28□□□□□ -1.08
Usp47Q8BY87 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp47Q8BY87 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
Usp47Q8BY87 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Usp47Q8BY87 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC8.27□□□□□ -1.08
Usp47Q8BY87 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.27□□□□□ -1.08
Usp47Q8BY87 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Usp47Q8BY87 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm37553-201ENSMUST00000194135 1602 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm14998-201ENSMUST00000120502 495 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms